Use bioinformatics command-line tools in your web apps with just a few lines of code. Powered by WebAssembly.
Get Started| App | Why Biowasm? |
|---|---|
| sandbox.bio | Runs command-line tools in the browser to power interactive tutorials |
| 42basepairs | Runs samtools, bedtools, bcftools and other tools to preview genomic files |
| CZ ID | Runs htsfile and seqtk to identify data issues before file upload |
| Nanopore | Runs samtools to generate .bam files after basecalling in the browser |
| ViralWasm | Runs minimap2 and ViralConsensus for viral molecular epidemiology analysis |
| CRISPRLungo | Runs `minimap2` as part of a long-read CRISPR analysis pipeline |
| Datagrok | Runs kalign in the browser for multiple-sequence alignment analysis |
| bedqc | Runs bedtools in the browser to validate .bed files |
| Ribbon | Runs samtools in the browser to parse, estimate coverage and subsample .bam files |
| fastq.bio | Runs fastp in the browser to evaluate sequencing data quality |